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miltenyi il 10 secretion assay  (Miltenyi Biotec)


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    Structured Review

    Miltenyi Biotec miltenyi il 10 secretion assay
    A, Schematic of Treg experimental design. Briefly, individual Tregs in CCEs were activated with T cell TransAct and stimulated with various cytokine cocktails for 6 days (Conditions I-IV) or 13 days (Conditions I+III). Tregs stimulated for 13 days were also stained for <t>surface</t> <t>IL-10</t> protein levels. B , Uniform manifold approximation and projection (UMAP) of batch-corrected transcriptomic profiles of all 21,922 T cells from both 6 and 13 day time points colored by (left to right, top to bottom) FOXP3 expression, CellTypist predicted cell types from Hao et al. PBMC atlas (see methods) , experimental stimulation condition, and Leiden cluster. C , Composition plot of experimental condition by Leiden cluster for clusters 1-3. D , Dot plot of Treg activation (red) and suppression (blue) markers for Leiden clusters 1-3. E , Violin plot of tissue Treg scores of cells profiled at day 6 in each experimental condition (see Methods). F , Kernel density estimate plot for cells profiled at day 6 of cell area, and cell cycling score (see Methods). Dotted line represents delineation between low area and high area cells in G. G , Volcano plot of differential expression (DE) analysis between large Tregs (cell area > 3000 pixels, i.e. diameter > 15.4 μm), and small Tregs (cell area < 3000 pixels). Red points: genes upregulated in large cells (right, FDR < 0.05, log2FC > 1), or genes upregulated in small cells (left, FDR < 0.05, log2FC < -1). Shown right are two brightfield images of cells typifying these classes. H , Kernel density estimate (KDE) plots of IL-10 immunofluorescence (IF) signal for cells profiled at day 13 in majority Treg clusters, and cells in majority Tconv. clusters . The dotted line represents delineation between low IL-10 and high IL-10 cells in I. I , Volcano plot of DE analysis between Tconv. cells with high IL10 IF signal (IL-10 IF > 10) and low IL-10 IF signal (IL-10 IF < 10). Red points: genes upregulated in IL-10 IF-high Tconvs. (right, FDR < 0.05, log2FC > 1). Shown right IF images of two cells typifying these classes. J , DE analysis between T cells profiled on day 13 with high eccentricity (eccentricity > 0.9) and cells with low eccentricity (eccentricity < 0.9). Red points: genes upregulated in highly eccentric cells (right, FDR < 0.05, log2FC > 0.5), or genes upregulated in low eccentricity cells (left, FDR < 0.05, log2FC < -0.5). Shown right are two IF images of cells typifying these classes. *Padj<0.05, **Padj<0.01, ***Padj<0.001 .
    Miltenyi Il 10 Secretion Assay, supplied by Miltenyi Biotec, used in various techniques. Bioz Stars score: 97/100, based on 5 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/il+10+secretion+detection+kit/IL-10+Secretion+Assay+-+Detection+Kit+(PE)%2C+human/bio_rxiv__64898__2026__05__05__723043-198-9-9
    Average 97 stars, based on 5 article reviews
    miltenyi il 10 secretion assay - by Bioz Stars, 2026-09
    97/100 stars

    Images

    1) Product Images from "Linking live-cell behavior to transcriptional responses across perturbations using dynamic caging"

    Article Title: Linking live-cell behavior to transcriptional responses across perturbations using dynamic caging

    Journal: bioRxiv

    doi: 10.64898/2026.05.05.723043

    A, Schematic of Treg experimental design. Briefly, individual Tregs in CCEs were activated with T cell TransAct and stimulated with various cytokine cocktails for 6 days (Conditions I-IV) or 13 days (Conditions I+III). Tregs stimulated for 13 days were also stained for surface IL-10 protein levels. B , Uniform manifold approximation and projection (UMAP) of batch-corrected transcriptomic profiles of all 21,922 T cells from both 6 and 13 day time points colored by (left to right, top to bottom) FOXP3 expression, CellTypist predicted cell types from Hao et al. PBMC atlas (see methods) , experimental stimulation condition, and Leiden cluster. C , Composition plot of experimental condition by Leiden cluster for clusters 1-3. D , Dot plot of Treg activation (red) and suppression (blue) markers for Leiden clusters 1-3. E , Violin plot of tissue Treg scores of cells profiled at day 6 in each experimental condition (see Methods). F , Kernel density estimate plot for cells profiled at day 6 of cell area, and cell cycling score (see Methods). Dotted line represents delineation between low area and high area cells in G. G , Volcano plot of differential expression (DE) analysis between large Tregs (cell area > 3000 pixels, i.e. diameter > 15.4 μm), and small Tregs (cell area < 3000 pixels). Red points: genes upregulated in large cells (right, FDR < 0.05, log2FC > 1), or genes upregulated in small cells (left, FDR < 0.05, log2FC < -1). Shown right are two brightfield images of cells typifying these classes. H , Kernel density estimate (KDE) plots of IL-10 immunofluorescence (IF) signal for cells profiled at day 13 in majority Treg clusters, and cells in majority Tconv. clusters . The dotted line represents delineation between low IL-10 and high IL-10 cells in I. I , Volcano plot of DE analysis between Tconv. cells with high IL10 IF signal (IL-10 IF > 10) and low IL-10 IF signal (IL-10 IF < 10). Red points: genes upregulated in IL-10 IF-high Tconvs. (right, FDR < 0.05, log2FC > 1). Shown right IF images of two cells typifying these classes. J , DE analysis between T cells profiled on day 13 with high eccentricity (eccentricity > 0.9) and cells with low eccentricity (eccentricity < 0.9). Red points: genes upregulated in highly eccentric cells (right, FDR < 0.05, log2FC > 0.5), or genes upregulated in low eccentricity cells (left, FDR < 0.05, log2FC < -0.5). Shown right are two IF images of cells typifying these classes. *Padj<0.05, **Padj<0.01, ***Padj<0.001 .
    Figure Legend Snippet: A, Schematic of Treg experimental design. Briefly, individual Tregs in CCEs were activated with T cell TransAct and stimulated with various cytokine cocktails for 6 days (Conditions I-IV) or 13 days (Conditions I+III). Tregs stimulated for 13 days were also stained for surface IL-10 protein levels. B , Uniform manifold approximation and projection (UMAP) of batch-corrected transcriptomic profiles of all 21,922 T cells from both 6 and 13 day time points colored by (left to right, top to bottom) FOXP3 expression, CellTypist predicted cell types from Hao et al. PBMC atlas (see methods) , experimental stimulation condition, and Leiden cluster. C , Composition plot of experimental condition by Leiden cluster for clusters 1-3. D , Dot plot of Treg activation (red) and suppression (blue) markers for Leiden clusters 1-3. E , Violin plot of tissue Treg scores of cells profiled at day 6 in each experimental condition (see Methods). F , Kernel density estimate plot for cells profiled at day 6 of cell area, and cell cycling score (see Methods). Dotted line represents delineation between low area and high area cells in G. G , Volcano plot of differential expression (DE) analysis between large Tregs (cell area > 3000 pixels, i.e. diameter > 15.4 μm), and small Tregs (cell area < 3000 pixels). Red points: genes upregulated in large cells (right, FDR < 0.05, log2FC > 1), or genes upregulated in small cells (left, FDR < 0.05, log2FC < -1). Shown right are two brightfield images of cells typifying these classes. H , Kernel density estimate (KDE) plots of IL-10 immunofluorescence (IF) signal for cells profiled at day 13 in majority Treg clusters, and cells in majority Tconv. clusters . The dotted line represents delineation between low IL-10 and high IL-10 cells in I. I , Volcano plot of DE analysis between Tconv. cells with high IL10 IF signal (IL-10 IF > 10) and low IL-10 IF signal (IL-10 IF < 10). Red points: genes upregulated in IL-10 IF-high Tconvs. (right, FDR < 0.05, log2FC > 1). Shown right IF images of two cells typifying these classes. J , DE analysis between T cells profiled on day 13 with high eccentricity (eccentricity > 0.9) and cells with low eccentricity (eccentricity < 0.9). Red points: genes upregulated in highly eccentric cells (right, FDR < 0.05, log2FC > 0.5), or genes upregulated in low eccentricity cells (left, FDR < 0.05, log2FC < -0.5). Shown right are two IF images of cells typifying these classes. *Padj<0.05, **Padj<0.01, ***Padj<0.001 .

    Techniques Used: Staining, Expressing, Activation Assay, Quantitative Proteomics, Immunofluorescence

    A , Confidence scores of CellTypist predictions for each CD4 T class included in Hao et al. PBMC atlas (all cells included). B , T cell receptor (TCR), and inflammatory T reg signature scores for Leiden clusters 1-3 in (see methods). C , UMAP of 17,967 T cells profiled at 6 days colored by (left to right, top to bottom) experimental condition, CellTypist predicted cell type, tissue Treg score, cell size, and cycling score. D , UMAP of 3,955 T cells profiled at 13 days colored by (left to right) CellTypist predicted cell type, and IL-10 IF signal. E, UMAP of Hao et al. CD4 cells colored by (left to right) cell type, and IL10 expression. F, Dot plot of gene expression across cell types in Hao CD4 T cell atlas. G , Tr1 and Th2 signature scores for IL-10 IF high (IL-10 IF > 10) and IL-10 IF low (IL-10 IF < 10) T conventional cells (see methods). H , Inferred transcription factor activity score for IL-10 IF high and low Tconv cells. Transcription factor inference was performed using a univariate linear model from decoupler and the CollecTRI transcription factor database. I , UMAP of cells profiled at 13 days colored by (left to right) eccentricity, and Leiden cluster. J, Dot plot of gene expression for high (eccentricity > 0.5) and low eccentricity (eccentricity < 0.5) cells in each Leiden cluster in H. P values for gene score comparison and DE analysis were calculated using a two-sided Wilcoxon rank sum test. *Padj<0.05, **Padj<0.01, ***Padj<0.001 .
    Figure Legend Snippet: A , Confidence scores of CellTypist predictions for each CD4 T class included in Hao et al. PBMC atlas (all cells included). B , T cell receptor (TCR), and inflammatory T reg signature scores for Leiden clusters 1-3 in (see methods). C , UMAP of 17,967 T cells profiled at 6 days colored by (left to right, top to bottom) experimental condition, CellTypist predicted cell type, tissue Treg score, cell size, and cycling score. D , UMAP of 3,955 T cells profiled at 13 days colored by (left to right) CellTypist predicted cell type, and IL-10 IF signal. E, UMAP of Hao et al. CD4 cells colored by (left to right) cell type, and IL10 expression. F, Dot plot of gene expression across cell types in Hao CD4 T cell atlas. G , Tr1 and Th2 signature scores for IL-10 IF high (IL-10 IF > 10) and IL-10 IF low (IL-10 IF < 10) T conventional cells (see methods). H , Inferred transcription factor activity score for IL-10 IF high and low Tconv cells. Transcription factor inference was performed using a univariate linear model from decoupler and the CollecTRI transcription factor database. I , UMAP of cells profiled at 13 days colored by (left to right) eccentricity, and Leiden cluster. J, Dot plot of gene expression for high (eccentricity > 0.5) and low eccentricity (eccentricity < 0.5) cells in each Leiden cluster in H. P values for gene score comparison and DE analysis were calculated using a two-sided Wilcoxon rank sum test. *Padj<0.05, **Padj<0.01, ***Padj<0.001 .

    Techniques Used: Expressing, Gene Expression, Activity Assay, Comparison

    Related Articles

    Staining:

    Article Title: The Development and Function of Regulatory B Cells Expressing IL-10 (B10 cells) Requires Antigen Receptor Diversity and TLR Signals
    Article Snippet: .. IL-10-secreting spleen B cells were identified using an IL-10 secretion detection kit (Miltenyi Biotech, Auburn, CA) with subsequent staining for CD19 expression before cell sorting into IL-10 + CD19 + and IL-10 − CD19 + populations. .. Total RNA was extracted from the purified B cells using TRIzol (Invitrogen-Molecular Probes), with relative cytokine transcripts quantified by GeneChip analysis (Affymetrix Mouse Genome 430 2.0 GeneChips; Affymetrix, Santa Clara, CA).

    Article Title: Regulatory B cells and their uses
    Article Snippet: 11.1.5 B Cell Cytokine Transcript Expression Analysis Purified spleen B cells were cultured for 5 hours with LPS+PMA+ionomycin (L+PI). .. IL-10-secreting spleen B cells were identified using an IL-10 secretion detection kit (Miltenyi Biotech, Auburn, Calif.) with subsequent staining for CD19 expression before cell sorting into IL-10+CD19+ and IL-10−CD19+ populations. .. Total RNA was extracted from the purified B cells using TRIzol (Invitrogen-Molecular Probes), with relative cytokine transcripts quantified by GeneChip analysis (Affymetrix Mouse Genome 430 2.0 GeneChips; Affymetrix, Santa Clara, Calif.).

    Article Title: Characterization of a rare IL-10-competent B-cell subset in humans that parallels mouse regulatory B10 cells
    Article Snippet: Culture supernatant fluid IL-10 concentrations for triplicate samples were quantified using IL-10 OptEIA ELISA kits (BD Biosciences) following the manufacturer's protocols. .. IL10 transcript expression In some experiments, IL-10-secreting blood B cells were identified after 4 hours of in vitro stimulation using an IL-10 secretion detection kit (Miltenyi Biotec) with subsequent staining for CD19 expression before cell sorting into IL-10 + CD19 + and IL-10 − CD19 + populations. ..

    Article Title: Regulatory B cells and their uses
    Article Snippet: .. B Cell IL10 Transcript Expression In some experiments, IL-10-secreting blood B cells were identified after 4 h of in vitro stimulation using an IL-10 secretion detection kit (Miltenyi Biotech, Auburn, Calif.) with subsequent staining for CD19 expression before cell sorting into IL-10+CD19+ and IL-10−CD19+ populations. .. Total RNA was extracted from the purified B cells using Qiagen RNeasy spin columns (Qiagen Ltd., Crawley, UK).

    Article Title: Regulatory B cells and their uses
    Article Snippet: .. IL-10-secreting spleen B cells were identified using an IL-10 secretion detection kit (Miltenyi Biotech, Auburn, Calif.) with subsequent staining for CD19 expression before cell sorting into IL-10+CD19+ and IL-10−CD19+ populations. .. Total RNA was extracted from the purified B cells using TRIzol (Invitrogen-Molecular Probes), with relative cytokine transcripts quantified by GeneChip analysis (Affymetrix Mouse Genome 430 2.0 GeneChips; Affymetrix, Santa Clara, Calif.).

    Expressing:

    Article Title: The Development and Function of Regulatory B Cells Expressing IL-10 (B10 cells) Requires Antigen Receptor Diversity and TLR Signals
    Article Snippet: .. IL-10-secreting spleen B cells were identified using an IL-10 secretion detection kit (Miltenyi Biotech, Auburn, CA) with subsequent staining for CD19 expression before cell sorting into IL-10 + CD19 + and IL-10 − CD19 + populations. .. Total RNA was extracted from the purified B cells using TRIzol (Invitrogen-Molecular Probes), with relative cytokine transcripts quantified by GeneChip analysis (Affymetrix Mouse Genome 430 2.0 GeneChips; Affymetrix, Santa Clara, CA).

    Article Title: Regulatory B cells and their uses
    Article Snippet: 11.1.5 B Cell Cytokine Transcript Expression Analysis Purified spleen B cells were cultured for 5 hours with LPS+PMA+ionomycin (L+PI). .. IL-10-secreting spleen B cells were identified using an IL-10 secretion detection kit (Miltenyi Biotech, Auburn, Calif.) with subsequent staining for CD19 expression before cell sorting into IL-10+CD19+ and IL-10−CD19+ populations. .. Total RNA was extracted from the purified B cells using TRIzol (Invitrogen-Molecular Probes), with relative cytokine transcripts quantified by GeneChip analysis (Affymetrix Mouse Genome 430 2.0 GeneChips; Affymetrix, Santa Clara, Calif.).

    Article Title: Regulatory B cells and their uses
    Article Snippet: .. 6.1.9 Microarray Expression Profiling For microarray analysis, viable IL-10 secreting B cells were detected after 5 hours of LPS, PMA, and ionomycin stimulation using an IL-10 secretion detection kit (Miltenyi Biotech) before cell sorting. .. RNAs from purified B cell subsets were prepared as above and processed for use on Affymetrix Mouse Genome 430 2.0 GeneChips (Affymetrix, Santa Clara, Calif.).

    Article Title: Characterization of a rare IL-10-competent B-cell subset in humans that parallels mouse regulatory B10 cells
    Article Snippet: Culture supernatant fluid IL-10 concentrations for triplicate samples were quantified using IL-10 OptEIA ELISA kits (BD Biosciences) following the manufacturer's protocols. .. IL10 transcript expression In some experiments, IL-10-secreting blood B cells were identified after 4 hours of in vitro stimulation using an IL-10 secretion detection kit (Miltenyi Biotec) with subsequent staining for CD19 expression before cell sorting into IL-10 + CD19 + and IL-10 − CD19 + populations. ..

    Article Title: Regulatory B cells and their uses
    Article Snippet: .. B Cell IL10 Transcript Expression In some experiments, IL-10-secreting blood B cells were identified after 4 h of in vitro stimulation using an IL-10 secretion detection kit (Miltenyi Biotech, Auburn, Calif.) with subsequent staining for CD19 expression before cell sorting into IL-10+CD19+ and IL-10−CD19+ populations. .. Total RNA was extracted from the purified B cells using Qiagen RNeasy spin columns (Qiagen Ltd., Crawley, UK).

    Article Title: Regulatory B cells and their uses
    Article Snippet: .. 6.1.9 Microarray Expression Profiling For microarray analysis, viable IL-10 secreting B cells were detected after 5 hours of LPS, PMA, and ionomycin stimulation using an IL-10 secretion detection kit (Miltenyi Biotech) before cell sorting. .. RNAs from purified B cell subsets were prepared as above and processed for use on Affymetrix Mouse Genome 430 2.0 GeneChips (Affymetrix, Santa Clara, Calif.).

    Article Title: Regulatory B cells and their uses
    Article Snippet: .. IL-10-secreting spleen B cells were identified using an IL-10 secretion detection kit (Miltenyi Biotech, Auburn, Calif.) with subsequent staining for CD19 expression before cell sorting into IL-10+CD19+ and IL-10−CD19+ populations. .. Total RNA was extracted from the purified B cells using TRIzol (Invitrogen-Molecular Probes), with relative cytokine transcripts quantified by GeneChip analysis (Affymetrix Mouse Genome 430 2.0 GeneChips; Affymetrix, Santa Clara, Calif.).

    FACS:

    Article Title: The Development and Function of Regulatory B Cells Expressing IL-10 (B10 cells) Requires Antigen Receptor Diversity and TLR Signals
    Article Snippet: .. IL-10-secreting spleen B cells were identified using an IL-10 secretion detection kit (Miltenyi Biotech, Auburn, CA) with subsequent staining for CD19 expression before cell sorting into IL-10 + CD19 + and IL-10 − CD19 + populations. .. Total RNA was extracted from the purified B cells using TRIzol (Invitrogen-Molecular Probes), with relative cytokine transcripts quantified by GeneChip analysis (Affymetrix Mouse Genome 430 2.0 GeneChips; Affymetrix, Santa Clara, CA).

    Article Title: Regulatory B cells and their uses
    Article Snippet: 11.1.5 B Cell Cytokine Transcript Expression Analysis Purified spleen B cells were cultured for 5 hours with LPS+PMA+ionomycin (L+PI). .. IL-10-secreting spleen B cells were identified using an IL-10 secretion detection kit (Miltenyi Biotech, Auburn, Calif.) with subsequent staining for CD19 expression before cell sorting into IL-10+CD19+ and IL-10−CD19+ populations. .. Total RNA was extracted from the purified B cells using TRIzol (Invitrogen-Molecular Probes), with relative cytokine transcripts quantified by GeneChip analysis (Affymetrix Mouse Genome 430 2.0 GeneChips; Affymetrix, Santa Clara, Calif.).

    Article Title: Regulatory B cells and their uses
    Article Snippet: .. 6.1.9 Microarray Expression Profiling For microarray analysis, viable IL-10 secreting B cells were detected after 5 hours of LPS, PMA, and ionomycin stimulation using an IL-10 secretion detection kit (Miltenyi Biotech) before cell sorting. .. RNAs from purified B cell subsets were prepared as above and processed for use on Affymetrix Mouse Genome 430 2.0 GeneChips (Affymetrix, Santa Clara, Calif.).

    Article Title: Characterization of a rare IL-10-competent B-cell subset in humans that parallels mouse regulatory B10 cells
    Article Snippet: Culture supernatant fluid IL-10 concentrations for triplicate samples were quantified using IL-10 OptEIA ELISA kits (BD Biosciences) following the manufacturer's protocols. .. IL10 transcript expression In some experiments, IL-10-secreting blood B cells were identified after 4 hours of in vitro stimulation using an IL-10 secretion detection kit (Miltenyi Biotec) with subsequent staining for CD19 expression before cell sorting into IL-10 + CD19 + and IL-10 − CD19 + populations. ..

    Article Title: Regulatory B cells and their uses
    Article Snippet: .. B Cell IL10 Transcript Expression In some experiments, IL-10-secreting blood B cells were identified after 4 h of in vitro stimulation using an IL-10 secretion detection kit (Miltenyi Biotech, Auburn, Calif.) with subsequent staining for CD19 expression before cell sorting into IL-10+CD19+ and IL-10−CD19+ populations. .. Total RNA was extracted from the purified B cells using Qiagen RNeasy spin columns (Qiagen Ltd., Crawley, UK).

    Article Title: Regulatory B cells and their uses
    Article Snippet: .. 6.1.9 Microarray Expression Profiling For microarray analysis, viable IL-10 secreting B cells were detected after 5 hours of LPS, PMA, and ionomycin stimulation using an IL-10 secretion detection kit (Miltenyi Biotech) before cell sorting. .. RNAs from purified B cell subsets were prepared as above and processed for use on Affymetrix Mouse Genome 430 2.0 GeneChips (Affymetrix, Santa Clara, Calif.).

    Article Title: Regulatory B cells and their uses
    Article Snippet: .. IL-10-secreting spleen B cells were identified using an IL-10 secretion detection kit (Miltenyi Biotech, Auburn, Calif.) with subsequent staining for CD19 expression before cell sorting into IL-10+CD19+ and IL-10−CD19+ populations. .. Total RNA was extracted from the purified B cells using TRIzol (Invitrogen-Molecular Probes), with relative cytokine transcripts quantified by GeneChip analysis (Affymetrix Mouse Genome 430 2.0 GeneChips; Affymetrix, Santa Clara, Calif.).

    Microarray:

    Article Title: Regulatory B cells and their uses
    Article Snippet: .. 6.1.9 Microarray Expression Profiling For microarray analysis, viable IL-10 secreting B cells were detected after 5 hours of LPS, PMA, and ionomycin stimulation using an IL-10 secretion detection kit (Miltenyi Biotech) before cell sorting. .. RNAs from purified B cell subsets were prepared as above and processed for use on Affymetrix Mouse Genome 430 2.0 GeneChips (Affymetrix, Santa Clara, Calif.).

    Article Title: Regulatory B cells and their uses
    Article Snippet: .. 6.1.9 Microarray Expression Profiling For microarray analysis, viable IL-10 secreting B cells were detected after 5 hours of LPS, PMA, and ionomycin stimulation using an IL-10 secretion detection kit (Miltenyi Biotech) before cell sorting. .. RNAs from purified B cell subsets were prepared as above and processed for use on Affymetrix Mouse Genome 430 2.0 GeneChips (Affymetrix, Santa Clara, Calif.).

    In Vitro:

    Article Title: Characterization of a rare IL-10-competent B-cell subset in humans that parallels mouse regulatory B10 cells
    Article Snippet: Culture supernatant fluid IL-10 concentrations for triplicate samples were quantified using IL-10 OptEIA ELISA kits (BD Biosciences) following the manufacturer's protocols. .. IL10 transcript expression In some experiments, IL-10-secreting blood B cells were identified after 4 hours of in vitro stimulation using an IL-10 secretion detection kit (Miltenyi Biotec) with subsequent staining for CD19 expression before cell sorting into IL-10 + CD19 + and IL-10 − CD19 + populations. ..

    Article Title: Regulatory B cells and their uses
    Article Snippet: .. B Cell IL10 Transcript Expression In some experiments, IL-10-secreting blood B cells were identified after 4 h of in vitro stimulation using an IL-10 secretion detection kit (Miltenyi Biotech, Auburn, Calif.) with subsequent staining for CD19 expression before cell sorting into IL-10+CD19+ and IL-10−CD19+ populations. .. Total RNA was extracted from the purified B cells using Qiagen RNeasy spin columns (Qiagen Ltd., Crawley, UK).



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    A, Schematic of Treg experimental design. Briefly, individual Tregs in CCEs were activated with T cell TransAct and stimulated with various cytokine cocktails for 6 days (Conditions I-IV) or 13 days (Conditions I+III). Tregs stimulated for 13 days were also stained for <t>surface</t> <t>IL-10</t> protein levels. B , Uniform manifold approximation and projection (UMAP) of batch-corrected transcriptomic profiles of all 21,922 T cells from both 6 and 13 day time points colored by (left to right, top to bottom) FOXP3 expression, CellTypist predicted cell types from Hao et al. PBMC atlas (see methods) , experimental stimulation condition, and Leiden cluster. C , Composition plot of experimental condition by Leiden cluster for clusters 1-3. D , Dot plot of Treg activation (red) and suppression (blue) markers for Leiden clusters 1-3. E , Violin plot of tissue Treg scores of cells profiled at day 6 in each experimental condition (see Methods). F , Kernel density estimate plot for cells profiled at day 6 of cell area, and cell cycling score (see Methods). Dotted line represents delineation between low area and high area cells in G. G , Volcano plot of differential expression (DE) analysis between large Tregs (cell area > 3000 pixels, i.e. diameter > 15.4 μm), and small Tregs (cell area < 3000 pixels). Red points: genes upregulated in large cells (right, FDR < 0.05, log2FC > 1), or genes upregulated in small cells (left, FDR < 0.05, log2FC < -1). Shown right are two brightfield images of cells typifying these classes. H , Kernel density estimate (KDE) plots of IL-10 immunofluorescence (IF) signal for cells profiled at day 13 in majority Treg clusters, and cells in majority Tconv. clusters . The dotted line represents delineation between low IL-10 and high IL-10 cells in I. I , Volcano plot of DE analysis between Tconv. cells with high IL10 IF signal (IL-10 IF > 10) and low IL-10 IF signal (IL-10 IF < 10). Red points: genes upregulated in IL-10 IF-high Tconvs. (right, FDR < 0.05, log2FC > 1). Shown right IF images of two cells typifying these classes. J , DE analysis between T cells profiled on day 13 with high eccentricity (eccentricity > 0.9) and cells with low eccentricity (eccentricity < 0.9). Red points: genes upregulated in highly eccentric cells (right, FDR < 0.05, log2FC > 0.5), or genes upregulated in low eccentricity cells (left, FDR < 0.05, log2FC < -0.5). Shown right are two IF images of cells typifying these classes. *Padj<0.05, **Padj<0.01, ***Padj<0.001 .
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    Miltenyi Biotec il 10 secretion assay detection kit
    A, Schematic of Treg experimental design. Briefly, individual Tregs in CCEs were activated with T cell TransAct and stimulated with various cytokine cocktails for 6 days (Conditions I-IV) or 13 days (Conditions I+III). Tregs stimulated for 13 days were also stained for <t>surface</t> <t>IL-10</t> protein levels. B , Uniform manifold approximation and projection (UMAP) of batch-corrected transcriptomic profiles of all 21,922 T cells from both 6 and 13 day time points colored by (left to right, top to bottom) FOXP3 expression, CellTypist predicted cell types from Hao et al. PBMC atlas (see methods) , experimental stimulation condition, and Leiden cluster. C , Composition plot of experimental condition by Leiden cluster for clusters 1-3. D , Dot plot of Treg activation (red) and suppression (blue) markers for Leiden clusters 1-3. E , Violin plot of tissue Treg scores of cells profiled at day 6 in each experimental condition (see Methods). F , Kernel density estimate plot for cells profiled at day 6 of cell area, and cell cycling score (see Methods). Dotted line represents delineation between low area and high area cells in G. G , Volcano plot of differential expression (DE) analysis between large Tregs (cell area > 3000 pixels, i.e. diameter > 15.4 μm), and small Tregs (cell area < 3000 pixels). Red points: genes upregulated in large cells (right, FDR < 0.05, log2FC > 1), or genes upregulated in small cells (left, FDR < 0.05, log2FC < -1). Shown right are two brightfield images of cells typifying these classes. H , Kernel density estimate (KDE) plots of IL-10 immunofluorescence (IF) signal for cells profiled at day 13 in majority Treg clusters, and cells in majority Tconv. clusters . The dotted line represents delineation between low IL-10 and high IL-10 cells in I. I , Volcano plot of DE analysis between Tconv. cells with high IL10 IF signal (IL-10 IF > 10) and low IL-10 IF signal (IL-10 IF < 10). Red points: genes upregulated in IL-10 IF-high Tconvs. (right, FDR < 0.05, log2FC > 1). Shown right IF images of two cells typifying these classes. J , DE analysis between T cells profiled on day 13 with high eccentricity (eccentricity > 0.9) and cells with low eccentricity (eccentricity < 0.9). Red points: genes upregulated in highly eccentric cells (right, FDR < 0.05, log2FC > 0.5), or genes upregulated in low eccentricity cells (left, FDR < 0.05, log2FC < -0.5). Shown right are two IF images of cells typifying these classes. *Padj<0.05, **Padj<0.01, ***Padj<0.001 .
    Il 10 Secretion Assay Detection Kit, supplied by Miltenyi Biotec, used in various techniques. Bioz Stars score: 97/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Miltenyi Biotec il 10 secretion assay
    A, Schematic of Treg experimental design. Briefly, individual Tregs in CCEs were activated with T cell TransAct and stimulated with various cytokine cocktails for 6 days (Conditions I-IV) or 13 days (Conditions I+III). Tregs stimulated for 13 days were also stained for <t>surface</t> <t>IL-10</t> protein levels. B , Uniform manifold approximation and projection (UMAP) of batch-corrected transcriptomic profiles of all 21,922 T cells from both 6 and 13 day time points colored by (left to right, top to bottom) FOXP3 expression, CellTypist predicted cell types from Hao et al. PBMC atlas (see methods) , experimental stimulation condition, and Leiden cluster. C , Composition plot of experimental condition by Leiden cluster for clusters 1-3. D , Dot plot of Treg activation (red) and suppression (blue) markers for Leiden clusters 1-3. E , Violin plot of tissue Treg scores of cells profiled at day 6 in each experimental condition (see Methods). F , Kernel density estimate plot for cells profiled at day 6 of cell area, and cell cycling score (see Methods). Dotted line represents delineation between low area and high area cells in G. G , Volcano plot of differential expression (DE) analysis between large Tregs (cell area > 3000 pixels, i.e. diameter > 15.4 μm), and small Tregs (cell area < 3000 pixels). Red points: genes upregulated in large cells (right, FDR < 0.05, log2FC > 1), or genes upregulated in small cells (left, FDR < 0.05, log2FC < -1). Shown right are two brightfield images of cells typifying these classes. H , Kernel density estimate (KDE) plots of IL-10 immunofluorescence (IF) signal for cells profiled at day 13 in majority Treg clusters, and cells in majority Tconv. clusters . The dotted line represents delineation between low IL-10 and high IL-10 cells in I. I , Volcano plot of DE analysis between Tconv. cells with high IL10 IF signal (IL-10 IF > 10) and low IL-10 IF signal (IL-10 IF < 10). Red points: genes upregulated in IL-10 IF-high Tconvs. (right, FDR < 0.05, log2FC > 1). Shown right IF images of two cells typifying these classes. J , DE analysis between T cells profiled on day 13 with high eccentricity (eccentricity > 0.9) and cells with low eccentricity (eccentricity < 0.9). Red points: genes upregulated in highly eccentric cells (right, FDR < 0.05, log2FC > 0.5), or genes upregulated in low eccentricity cells (left, FDR < 0.05, log2FC < -0.5). Shown right are two IF images of cells typifying these classes. *Padj<0.05, **Padj<0.01, ***Padj<0.001 .
    Il 10 Secretion Assay, supplied by Miltenyi Biotec, used in various techniques. Bioz Stars score: 97/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/il+10+secretion+detection+kit/IL-10+Secretion+Assay+-+Detection+Kit+(APC)%2C+human/pmc12302006-138-0-4
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    Miltenyi Biotec il 10 secretion assay miltenyi biotec
    A, Schematic of Treg experimental design. Briefly, individual Tregs in CCEs were activated with T cell TransAct and stimulated with various cytokine cocktails for 6 days (Conditions I-IV) or 13 days (Conditions I+III). Tregs stimulated for 13 days were also stained for <t>surface</t> <t>IL-10</t> protein levels. B , Uniform manifold approximation and projection (UMAP) of batch-corrected transcriptomic profiles of all 21,922 T cells from both 6 and 13 day time points colored by (left to right, top to bottom) FOXP3 expression, CellTypist predicted cell types from Hao et al. PBMC atlas (see methods) , experimental stimulation condition, and Leiden cluster. C , Composition plot of experimental condition by Leiden cluster for clusters 1-3. D , Dot plot of Treg activation (red) and suppression (blue) markers for Leiden clusters 1-3. E , Violin plot of tissue Treg scores of cells profiled at day 6 in each experimental condition (see Methods). F , Kernel density estimate plot for cells profiled at day 6 of cell area, and cell cycling score (see Methods). Dotted line represents delineation between low area and high area cells in G. G , Volcano plot of differential expression (DE) analysis between large Tregs (cell area > 3000 pixels, i.e. diameter > 15.4 μm), and small Tregs (cell area < 3000 pixels). Red points: genes upregulated in large cells (right, FDR < 0.05, log2FC > 1), or genes upregulated in small cells (left, FDR < 0.05, log2FC < -1). Shown right are two brightfield images of cells typifying these classes. H , Kernel density estimate (KDE) plots of IL-10 immunofluorescence (IF) signal for cells profiled at day 13 in majority Treg clusters, and cells in majority Tconv. clusters . The dotted line represents delineation between low IL-10 and high IL-10 cells in I. I , Volcano plot of DE analysis between Tconv. cells with high IL10 IF signal (IL-10 IF > 10) and low IL-10 IF signal (IL-10 IF < 10). Red points: genes upregulated in IL-10 IF-high Tconvs. (right, FDR < 0.05, log2FC > 1). Shown right IF images of two cells typifying these classes. J , DE analysis between T cells profiled on day 13 with high eccentricity (eccentricity > 0.9) and cells with low eccentricity (eccentricity < 0.9). Red points: genes upregulated in highly eccentric cells (right, FDR < 0.05, log2FC > 0.5), or genes upregulated in low eccentricity cells (left, FDR < 0.05, log2FC < -0.5). Shown right are two IF images of cells typifying these classes. *Padj<0.05, **Padj<0.01, ***Padj<0.001 .
    Il 10 Secretion Assay Miltenyi Biotec, supplied by Miltenyi Biotec, used in various techniques. Bioz Stars score: 97/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Miltenyi Biotec miltenyi 130 090 761 flowjo
    A, Schematic of Treg experimental design. Briefly, individual Tregs in CCEs were activated with T cell TransAct and stimulated with various cytokine cocktails for 6 days (Conditions I-IV) or 13 days (Conditions I+III). Tregs stimulated for 13 days were also stained for <t>surface</t> <t>IL-10</t> protein levels. B , Uniform manifold approximation and projection (UMAP) of batch-corrected transcriptomic profiles of all 21,922 T cells from both 6 and 13 day time points colored by (left to right, top to bottom) FOXP3 expression, CellTypist predicted cell types from Hao et al. PBMC atlas (see methods) , experimental stimulation condition, and Leiden cluster. C , Composition plot of experimental condition by Leiden cluster for clusters 1-3. D , Dot plot of Treg activation (red) and suppression (blue) markers for Leiden clusters 1-3. E , Violin plot of tissue Treg scores of cells profiled at day 6 in each experimental condition (see Methods). F , Kernel density estimate plot for cells profiled at day 6 of cell area, and cell cycling score (see Methods). Dotted line represents delineation between low area and high area cells in G. G , Volcano plot of differential expression (DE) analysis between large Tregs (cell area > 3000 pixels, i.e. diameter > 15.4 μm), and small Tregs (cell area < 3000 pixels). Red points: genes upregulated in large cells (right, FDR < 0.05, log2FC > 1), or genes upregulated in small cells (left, FDR < 0.05, log2FC < -1). Shown right are two brightfield images of cells typifying these classes. H , Kernel density estimate (KDE) plots of IL-10 immunofluorescence (IF) signal for cells profiled at day 13 in majority Treg clusters, and cells in majority Tconv. clusters . The dotted line represents delineation between low IL-10 and high IL-10 cells in I. I , Volcano plot of DE analysis between Tconv. cells with high IL10 IF signal (IL-10 IF > 10) and low IL-10 IF signal (IL-10 IF < 10). Red points: genes upregulated in IL-10 IF-high Tconvs. (right, FDR < 0.05, log2FC > 1). Shown right IF images of two cells typifying these classes. J , DE analysis between T cells profiled on day 13 with high eccentricity (eccentricity > 0.9) and cells with low eccentricity (eccentricity < 0.9). Red points: genes upregulated in highly eccentric cells (right, FDR < 0.05, log2FC > 0.5), or genes upregulated in low eccentricity cells (left, FDR < 0.05, log2FC < -0.5). Shown right are two IF images of cells typifying these classes. *Padj<0.05, **Padj<0.01, ***Padj<0.001 .
    Miltenyi 130 090 761 Flowjo, supplied by Miltenyi Biotec, used in various techniques. Bioz Stars score: 97/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/il+10+secretion+detection+kit/IL-10+Secretion+Assay+-+Detection+Kit+(APC)%2C+human/pmc12128992__jciinsight-10-183076-s267-31-134-134
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    Image Search Results


    A, Schematic of Treg experimental design. Briefly, individual Tregs in CCEs were activated with T cell TransAct and stimulated with various cytokine cocktails for 6 days (Conditions I-IV) or 13 days (Conditions I+III). Tregs stimulated for 13 days were also stained for surface IL-10 protein levels. B , Uniform manifold approximation and projection (UMAP) of batch-corrected transcriptomic profiles of all 21,922 T cells from both 6 and 13 day time points colored by (left to right, top to bottom) FOXP3 expression, CellTypist predicted cell types from Hao et al. PBMC atlas (see methods) , experimental stimulation condition, and Leiden cluster. C , Composition plot of experimental condition by Leiden cluster for clusters 1-3. D , Dot plot of Treg activation (red) and suppression (blue) markers for Leiden clusters 1-3. E , Violin plot of tissue Treg scores of cells profiled at day 6 in each experimental condition (see Methods). F , Kernel density estimate plot for cells profiled at day 6 of cell area, and cell cycling score (see Methods). Dotted line represents delineation between low area and high area cells in G. G , Volcano plot of differential expression (DE) analysis between large Tregs (cell area > 3000 pixels, i.e. diameter > 15.4 μm), and small Tregs (cell area < 3000 pixels). Red points: genes upregulated in large cells (right, FDR < 0.05, log2FC > 1), or genes upregulated in small cells (left, FDR < 0.05, log2FC < -1). Shown right are two brightfield images of cells typifying these classes. H , Kernel density estimate (KDE) plots of IL-10 immunofluorescence (IF) signal for cells profiled at day 13 in majority Treg clusters, and cells in majority Tconv. clusters . The dotted line represents delineation between low IL-10 and high IL-10 cells in I. I , Volcano plot of DE analysis between Tconv. cells with high IL10 IF signal (IL-10 IF > 10) and low IL-10 IF signal (IL-10 IF < 10). Red points: genes upregulated in IL-10 IF-high Tconvs. (right, FDR < 0.05, log2FC > 1). Shown right IF images of two cells typifying these classes. J , DE analysis between T cells profiled on day 13 with high eccentricity (eccentricity > 0.9) and cells with low eccentricity (eccentricity < 0.9). Red points: genes upregulated in highly eccentric cells (right, FDR < 0.05, log2FC > 0.5), or genes upregulated in low eccentricity cells (left, FDR < 0.05, log2FC < -0.5). Shown right are two IF images of cells typifying these classes. *Padj<0.05, **Padj<0.01, ***Padj<0.001 .

    Journal: bioRxiv

    Article Title: Linking live-cell behavior to transcriptional responses across perturbations using dynamic caging

    doi: 10.64898/2026.05.05.723043

    Figure Lengend Snippet: A, Schematic of Treg experimental design. Briefly, individual Tregs in CCEs were activated with T cell TransAct and stimulated with various cytokine cocktails for 6 days (Conditions I-IV) or 13 days (Conditions I+III). Tregs stimulated for 13 days were also stained for surface IL-10 protein levels. B , Uniform manifold approximation and projection (UMAP) of batch-corrected transcriptomic profiles of all 21,922 T cells from both 6 and 13 day time points colored by (left to right, top to bottom) FOXP3 expression, CellTypist predicted cell types from Hao et al. PBMC atlas (see methods) , experimental stimulation condition, and Leiden cluster. C , Composition plot of experimental condition by Leiden cluster for clusters 1-3. D , Dot plot of Treg activation (red) and suppression (blue) markers for Leiden clusters 1-3. E , Violin plot of tissue Treg scores of cells profiled at day 6 in each experimental condition (see Methods). F , Kernel density estimate plot for cells profiled at day 6 of cell area, and cell cycling score (see Methods). Dotted line represents delineation between low area and high area cells in G. G , Volcano plot of differential expression (DE) analysis between large Tregs (cell area > 3000 pixels, i.e. diameter > 15.4 μm), and small Tregs (cell area < 3000 pixels). Red points: genes upregulated in large cells (right, FDR < 0.05, log2FC > 1), or genes upregulated in small cells (left, FDR < 0.05, log2FC < -1). Shown right are two brightfield images of cells typifying these classes. H , Kernel density estimate (KDE) plots of IL-10 immunofluorescence (IF) signal for cells profiled at day 13 in majority Treg clusters, and cells in majority Tconv. clusters . The dotted line represents delineation between low IL-10 and high IL-10 cells in I. I , Volcano plot of DE analysis between Tconv. cells with high IL10 IF signal (IL-10 IF > 10) and low IL-10 IF signal (IL-10 IF < 10). Red points: genes upregulated in IL-10 IF-high Tconvs. (right, FDR < 0.05, log2FC > 1). Shown right IF images of two cells typifying these classes. J , DE analysis between T cells profiled on day 13 with high eccentricity (eccentricity > 0.9) and cells with low eccentricity (eccentricity < 0.9). Red points: genes upregulated in highly eccentric cells (right, FDR < 0.05, log2FC > 0.5), or genes upregulated in low eccentricity cells (left, FDR < 0.05, log2FC < -0.5). Shown right are two IF images of cells typifying these classes. *Padj<0.05, **Padj<0.01, ***Padj<0.001 .

    Article Snippet: On day 13, IL-10 secretion was assessed using the Miltenyi IL-10 Secretion Assay (Cat# 130-090-434).

    Techniques: Staining, Expressing, Activation Assay, Quantitative Proteomics, Immunofluorescence

    A , Confidence scores of CellTypist predictions for each CD4 T class included in Hao et al. PBMC atlas (all cells included). B , T cell receptor (TCR), and inflammatory T reg signature scores for Leiden clusters 1-3 in (see methods). C , UMAP of 17,967 T cells profiled at 6 days colored by (left to right, top to bottom) experimental condition, CellTypist predicted cell type, tissue Treg score, cell size, and cycling score. D , UMAP of 3,955 T cells profiled at 13 days colored by (left to right) CellTypist predicted cell type, and IL-10 IF signal. E, UMAP of Hao et al. CD4 cells colored by (left to right) cell type, and IL10 expression. F, Dot plot of gene expression across cell types in Hao CD4 T cell atlas. G , Tr1 and Th2 signature scores for IL-10 IF high (IL-10 IF > 10) and IL-10 IF low (IL-10 IF < 10) T conventional cells (see methods). H , Inferred transcription factor activity score for IL-10 IF high and low Tconv cells. Transcription factor inference was performed using a univariate linear model from decoupler and the CollecTRI transcription factor database. I , UMAP of cells profiled at 13 days colored by (left to right) eccentricity, and Leiden cluster. J, Dot plot of gene expression for high (eccentricity > 0.5) and low eccentricity (eccentricity < 0.5) cells in each Leiden cluster in H. P values for gene score comparison and DE analysis were calculated using a two-sided Wilcoxon rank sum test. *Padj<0.05, **Padj<0.01, ***Padj<0.001 .

    Journal: bioRxiv

    Article Title: Linking live-cell behavior to transcriptional responses across perturbations using dynamic caging

    doi: 10.64898/2026.05.05.723043

    Figure Lengend Snippet: A , Confidence scores of CellTypist predictions for each CD4 T class included in Hao et al. PBMC atlas (all cells included). B , T cell receptor (TCR), and inflammatory T reg signature scores for Leiden clusters 1-3 in (see methods). C , UMAP of 17,967 T cells profiled at 6 days colored by (left to right, top to bottom) experimental condition, CellTypist predicted cell type, tissue Treg score, cell size, and cycling score. D , UMAP of 3,955 T cells profiled at 13 days colored by (left to right) CellTypist predicted cell type, and IL-10 IF signal. E, UMAP of Hao et al. CD4 cells colored by (left to right) cell type, and IL10 expression. F, Dot plot of gene expression across cell types in Hao CD4 T cell atlas. G , Tr1 and Th2 signature scores for IL-10 IF high (IL-10 IF > 10) and IL-10 IF low (IL-10 IF < 10) T conventional cells (see methods). H , Inferred transcription factor activity score for IL-10 IF high and low Tconv cells. Transcription factor inference was performed using a univariate linear model from decoupler and the CollecTRI transcription factor database. I , UMAP of cells profiled at 13 days colored by (left to right) eccentricity, and Leiden cluster. J, Dot plot of gene expression for high (eccentricity > 0.5) and low eccentricity (eccentricity < 0.5) cells in each Leiden cluster in H. P values for gene score comparison and DE analysis were calculated using a two-sided Wilcoxon rank sum test. *Padj<0.05, **Padj<0.01, ***Padj<0.001 .

    Article Snippet: On day 13, IL-10 secretion was assessed using the Miltenyi IL-10 Secretion Assay (Cat# 130-090-434).

    Techniques: Expressing, Gene Expression, Activity Assay, Comparison